Search found 2 matches

by sleungy
Wed Jan 09, 2019 1:32 am
Forum: Data analysis
Topic: Histocat neighborhood analysis
Replies: 2
Views: 1975

Re: Histocat neighborhood analysis

Dear Denis,

Thank you very much. I have described the issue now on GitHub https://github.com/BodenmillerGroup/histoCAT/issues/20

Kind Regards, Sherman
by sleungy
Mon Dec 31, 2018 5:00 am
Forum: Data analysis
Topic: Histocat neighborhood analysis
Replies: 2
Views: 1975

Histocat neighborhood analysis

Hi there, I am having trouble using Histocat's neighborhood analysis for Hyperion imaging cytof data. If anyone could help, I would be very grateful. Details below. (1) Using a single image and it’s phenograph clusters, neighborhood analyses shows a binary yes (red) or no (blue) heatmap (shown below...