Data analysis

New Topic

35 topics

Topics

Replies

Views

Last post

IMC data transformation and normalisation across ROI

Last post by votti « Sat Sep 07, 2019 8:15 am
Replies: 2
by acoenen » Fri Aug 23, 2019 10:09 am

2 Replies

153 Views

Last post by votti
Sat Sep 07, 2019 8:15 am
Preprocessing and normalization in histoCAT

Last post by jonas « Tue Aug 27, 2019 8:58 am
Replies: 5
by erikg » Wed Mar 14, 2018 3:48 pm

5 Replies

1993 Views

Last post by jonas
Tue Aug 27, 2019 8:58 am
CellProfiler error

Last post by monirathhav « Sat Aug 24, 2019 4:45 am

by monirathhav » Sat Aug 24, 2019 4:45 am

0 Replies

113 Views

Last post by monirathhav
Sat Aug 24, 2019 4:45 am
Export cell coordinates in histocat++

Last post by Seb « Thu Aug 08, 2019 9:04 pm
Replies: 2
by Seb » Wed Aug 07, 2019 4:02 pm

2 Replies

454 Views

Last post by Seb
Thu Aug 08, 2019 9:04 pm
Merge ROIs from IMC

Last post by Seb « Fri Aug 02, 2019 7:52 pm
Replies: 2
by Seb » Thu Aug 01, 2019 6:53 pm

2 Replies

268 Views

Last post by Seb
Fri Aug 02, 2019 7:52 pm
Cell population frequencies in HistoCat

Last post by DenisSchapiro « Fri Aug 02, 2019 6:33 pm
Replies: 12
by mattbliss90 » Tue Jul 24, 2018 6:12 pm
1

2
12 Replies

3708 Views

Last post by DenisSchapiro
Fri Aug 02, 2019 6:33 pm
HistoCAT++ crashing when trying to filter

Last post by RaulCatena « Fri Aug 02, 2019 7:56 am
Replies: 1
by Channels » Thu Jun 27, 2019 1:46 am

1 Replies

179 Views

Last post by RaulCatena
Fri Aug 02, 2019 7:56 am
Histocat - Differential cell neighborhood analysis

Last post by DenisSchapiro « Wed Jul 31, 2019 7:38 pm
Replies: 3
by sbooth » Tue Apr 23, 2019 11:36 pm

3 Replies

4566 Views

Last post by DenisSchapiro
Wed Jul 31, 2019 7:38 pm
any preprocessing before doing the analysis?

Last post by dalide « Tue Jun 04, 2019 8:52 pm

by dalide » Tue Jun 04, 2019 8:52 pm

0 Replies

521 Views

Last post by dalide
Tue Jun 04, 2019 8:52 pm
Custom masks

Last post by chipboy « Wed Apr 17, 2019 2:46 pm

by chipboy » Wed Apr 17, 2019 2:46 pm

0 Replies

506 Views

Last post by chipboy
Wed Apr 17, 2019 2:46 pm
histoCAT on Mac - tiny display fonts

Last post by DenisSchapiro « Mon Mar 11, 2019 7:58 pm
Replies: 1
by stoh » Tue Feb 05, 2019 8:35 pm

1 Replies

824 Views

Last post by DenisSchapiro
Mon Mar 11, 2019 7:58 pm
Histocat neighborhood analysis

Last post by sleungy « Wed Jan 09, 2019 1:32 am
Replies: 2
by sleungy » Mon Dec 31, 2018 5:00 am

2 Replies

1022 Views

Last post by sleungy
Wed Jan 09, 2019 1:32 am
Reproducibility PhenoGraph algorithm in histoCAT

Last post by DenisSchapiro « Tue Jan 08, 2019 7:52 pm
Replies: 3
by ElisaRasca » Wed Oct 31, 2018 2:32 pm

3 Replies

1827 Views

Last post by DenisSchapiro
Tue Jan 08, 2019 7:52 pm
Shannon Entropy to quantify cell heterogeneity?

Last post by sbooth « Tue Dec 11, 2018 5:30 pm
Replies: 2
by sbooth » Tue Dec 11, 2018 5:11 pm

2 Replies

982 Views

Last post by sbooth
Tue Dec 11, 2018 5:30 pm
Please report ALL histoCAT issues in Github

Last post by DenisSchapiro « Tue Nov 20, 2018 12:17 am

by DenisSchapiro » Tue Nov 20, 2018 12:17 am

0 Replies

1534 Views

Last post by DenisSchapiro
Tue Nov 20, 2018 12:17 am
Compensation slide acquisition

Last post by sbooth « Thu Nov 15, 2018 11:03 pm
Replies: 3
by sbooth » Mon Nov 12, 2018 6:27 pm

3 Replies

1451 Views

Last post by sbooth
Thu Nov 15, 2018 11:03 pm
Rphenograph

Last post by ElisaRasca « Fri Nov 02, 2018 5:50 pm
Replies: 2
by ElisaRasca » Wed Oct 31, 2018 3:22 pm

2 Replies

1131 Views

Last post by ElisaRasca
Fri Nov 02, 2018 5:50 pm
Bug with HistoCAT

Last post by monirathhav « Wed Oct 31, 2018 8:39 pm
Replies: 7
by monirathhav » Mon Oct 15, 2018 11:06 pm

7 Replies

2150 Views

Last post by monirathhav
Wed Oct 31, 2018 8:39 pm
Help with neighborhood analysis

Last post by DenisSchapiro « Tue Oct 30, 2018 8:29 pm
Replies: 8
by mattbliss90 » Fri Jul 06, 2018 6:52 pm

8 Replies

2467 Views

Last post by DenisSchapiro
Tue Oct 30, 2018 8:29 pm
histoCAT++ manual

Last post by ssivajothi « Mon Oct 29, 2018 12:50 pm
Replies: 25
by milind747 » Fri Jan 12, 2018 12:22 am
1

2

3
25 Replies

8774 Views

Last post by ssivajothi
Mon Oct 29, 2018 12:50 pm
histoCAT: Missing channels in Phenograph clusters

Last post by ElisaRasca « Tue Oct 16, 2018 7:45 am
Replies: 4
by ElisaRasca » Tue Oct 09, 2018 8:07 am

4 Replies

1550 Views

Last post by ElisaRasca
Tue Oct 16, 2018 7:45 am
Checking uncertainty in Ilastik

Last post by votti « Mon Oct 08, 2018 4:26 pm
Replies: 1
by monirathhav » Thu Oct 04, 2018 3:57 am

1 Replies

902 Views

Last post by votti
Mon Oct 08, 2018 4:26 pm
[HistoCAT] Import different masks for same image

Last post by DenisSchapiro « Tue Sep 25, 2018 2:20 pm
Replies: 1
by Judith » Fri Sep 21, 2018 6:38 pm

1 Replies

923 Views

Last post by DenisSchapiro
Tue Sep 25, 2018 2:20 pm
HistoCAT 1.75 Gating problem

Last post by DenisSchapiro « Tue Sep 25, 2018 2:11 pm
Replies: 3
by MicheleBorto » Fri Sep 07, 2018 10:33 am

3 Replies

1541 Views

Last post by DenisSchapiro
Tue Sep 25, 2018 2:11 pm
Histocat++ for windows?

Last post by RaulCatena « Wed Aug 08, 2018 2:55 pm
Replies: 1
by sbooth » Tue Jul 17, 2018 10:40 pm

1 Replies

1070 Views

Last post by RaulCatena
Wed Aug 08, 2018 2:55 pm

New Topic

35 topics

Return to Board Index

Forum permissions

You cannot post new topics in this forum
You cannot reply to topics in this forum
You cannot edit your posts in this forum
You cannot delete your posts in this forum
You cannot post attachments in this forum