question about the neighborhood analysis heatmap

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Computational image analysis of multiplexed Imaging Mass Cytometry acquisitions
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dalide
Posts: 2
Joined: Tue Jun 04, 2019 5:43 pm

question about the neighborhood analysis heatmap

Post by dalide » Thu Dec 05, 2019 5:50 pm

Hi I am pasting my question on the Github here, hopefully can get some answers.

here is the link
https://github.com/BodenmillerGroup/histoCAT/issues/42

It is about the neighborhood analysis heatmap, I read into the code and found that it seems the interpretation is opposite with the paper, I am trying to understand it so I can make correct interpretation for my customers.

Thanks
DenisSchapiro
Posts: 43
Joined: Wed Nov 29, 2017 11:34 am

Re: question about the neighborhood analysis heatmap

Post by DenisSchapiro » Tue Dec 17, 2019 8:27 pm

Thank you for the question. I will post a detailed response on Github.
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